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Code Availability

All articles tagged with #code availability

data-availability-and-code-availability2 years ago

Mapping Genomic Mutational Constraints and Disease-Related Variants in Human Genomes

The article provides information on the data and code availability for a genomic mutational constraint map using variation in 76,156 human genomes. The aggregated allele frequency dataset is available for download, along with constraint statistics, and individual-level data for specific projects. The code for quality control and computation of constraint statistics is also publicly available. The article includes references to related studies and resources for further exploration.

via Nature.com|
#code-availability#data-availability#data-availability-and-code-availability
neuroscience2 years ago

Unveiling the Neural Mechanisms of Survival during Fasting

Researchers have identified the neural basis for the activation of the hypothalamic-pituitary-adrenal (HPA) axis during fasting. Using fibre photometry, they observed increased activity in AgRP neurons in the hypothalamus, which led to the release of neuropeptide Y (NPY) and gamma-aminobutyric acid (GABA). This activation of AgRP neurons was found to be independent of feeding behavior and was mediated by the melanocortin-4 receptor (MC4R). The study provides insights into the neuroendocrine response to fasting and sheds light on the regulation of the HPA axis. Data and code availability are provided for further research.

via Nature.com|
#code-availability#fasting#fibre-photometry-data
technology2 years ago

Advancements in Heat-Assisted Imaging Revolutionize Night Vision

Heat-assisted detection and ranging (HADAR) is a technology that combines thermal imaging and LiDAR to enable 3D imaging in low-visibility conditions. The data and custom-designed codes for HADAR are available for research purposes. This technology has potential applications in autonomous vehicles, robotics, and surveillance systems.

via Nature.com|
#3d-imaging-sensor#code-availability#data-availability
scientific-research2 years ago

Efficient Tools for Continuous Megabase-Scale Genome Assembly

Researchers have developed a method for continuous synthesis of E. coli genome sections and assembly of Mb-scale human DNA. The study provides detailed data availability, including sequences, design details, and code used in the experiments. The research builds upon previous work in genome recoding and large-scale genome rearrangement, offering potential applications in synthetic biology and genetic engineering.

via Nature.com|
#code-availability#dna-assembly#e-coli